biological entity [CARO_0030000]

Entity that is, is part of, or derived from an organism, virus, or viroid or a collection of them. Important for alignment with Darwin Core class “Organism”.

Open biological entity in VFB

Example Images

biological entity biological entity biological entity biological entity biological entity

VFB Term Json

{
    "term": {
        "core": {
            "iri": "http://purl.obolibrary.org/obo/CARO_0030000",
            "symbol": "",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "CARO_0030000",
            "label": "biological entity"
        },
        "description": [
            "Entity that is, is part of, or derived from an organism, virus, or viroid or a collection of them."
        ],
        "comment": [
            "Important for alignment with Darwin Core class \"Organism\"."
        ]
    },
    "query": "Get JSON for Class",
    "version": "44725ae",
    "parents": [
        {
            "symbol": "",
            "iri": "http://purl.obolibrary.org/obo/BFO_0000004",
            "types": [
                "Entity",
                "Class"
            ],
            "short_form": "BFO_0000004",
            "label": "independent continuant"
        }
    ],
    "relationships": [
        {
            "relation": {
                "iri": "http://purl.obolibrary.org/obo/BFO_0000050",
                "label": "is part of",
                "type": "part_of"
            },
            "object": {
                "symbol": "",
                "iri": "http://purl.obolibrary.org/obo/CARO_0010004",
                "types": [
                    "Entity",
                    "Class"
                ],
                "short_form": "CARO_0010004",
                "label": "cellular organism"
            }
        }
    ],
    "xrefs": [],
    "anatomy_channel_image": [
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00104646",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "has_image"
                ],
                "short_form": "VFB_00104646",
                "label": "intermediate tectulum on adult VNC, JRC2018VU"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00200000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00200000",
                        "label": "JRC2018UnisexVNC_c"
                    },
                    "index": [
                        14
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00200000",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Ganglion",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00200000",
                        "label": "JRC2018UnisexVNC"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/4646/VFB_00200000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00104644",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00104644",
                    "label": "intermediate tectulum on adult VNC, JRC2018VU_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00104651",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "has_image"
                ],
                "short_form": "VFB_00104651",
                "label": "neck tectulum on adult VNC, JRC2018VU"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00200000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00200000",
                        "label": "JRC2018UnisexVNC_c"
                    },
                    "index": [
                        19
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00200000",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Ganglion",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00200000",
                        "label": "JRC2018UnisexVNC"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/4651/VFB_00200000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00104649",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00104649",
                    "label": "neck tectulum on adult VNC, JRC2018VU_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00030875",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "VFB",
                    "has_image"
                ],
                "short_form": "VFB_00030875",
                "label": "lobe system of adult mushroom body on adult brain template JFRC2"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00017894",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template",
                            "VFB"
                        ],
                        "short_form": "VFBc_00017894",
                        "label": "JFRC2_template_c"
                    },
                    "index": [
                        112
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00017894",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "VFB",
                            "has_image"
                        ],
                        "short_form": "VFB_00017894",
                        "label": "adult brain template JFRC2"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0003/0875/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00030875",
                    "types": [
                        "Entity",
                        "Individual",
                        "VFB"
                    ],
                    "short_form": "VFBc_00030875",
                    "label": "MB_L - painted domain JFRC2_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00100020",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "has_image"
                ],
                "short_form": "VFB_00100020",
                "label": "adult accessory mesothoracic neuromere on adult VNS template, Court2018"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00100000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00100000",
                        "label": "adult VNS template - Court2018_c"
                    },
                    "index": [
                        20
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00100000",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Ganglion",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00100000",
                        "label": "adult VNS template - Court2018"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/0020/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00100020",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00100020",
                    "label": "adult accessory mesothoracic neuromere on adult VNS template, Court2018_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        },
        {
            "anatomy": {
                "symbol": "",
                "iri": "http://virtualflybrain.org/reports/VFB_00104644",
                "types": [
                    "Entity",
                    "Adult",
                    "Anatomy",
                    "Individual",
                    "Nervous_system",
                    "Synaptic_neuropil",
                    "Synaptic_neuropil_domain",
                    "has_image"
                ],
                "short_form": "VFB_00104644",
                "label": "adult accessory mesothoracic neuromere on adult VNC, JRC2018VU"
            },
            "channel_image": {
                "image": {
                    "template_channel": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFBc_00200000",
                        "types": [
                            "Entity",
                            "Individual",
                            "Template"
                        ],
                        "short_form": "VFBc_00200000",
                        "label": "JRC2018UnisexVNC_c"
                    },
                    "index": [
                        12
                    ],
                    "template_anatomy": {
                        "symbol": "",
                        "iri": "http://virtualflybrain.org/reports/VFB_00200000",
                        "types": [
                            "Entity",
                            "Adult",
                            "Anatomy",
                            "Ganglion",
                            "Individual",
                            "Nervous_system",
                            "Template",
                            "has_image"
                        ],
                        "short_form": "VFB_00200000",
                        "label": "JRC2018UnisexVNC"
                    },
                    "image_folder": "http://www.virtualflybrain.org/data/VFB/i/0010/4644/VFB_00200000/"
                },
                "channel": {
                    "symbol": "",
                    "iri": "http://virtualflybrain.org/reports/VFBc_00104642",
                    "types": [
                        "Entity",
                        "Individual"
                    ],
                    "short_form": "VFBc_00104642",
                    "label": "adult accessory mesothoracic neuromere on adult VNC, JRC2018VU_c"
                },
                "imaging_technique": {
                    "symbol": "",
                    "iri": "http://purl.obolibrary.org/obo/FBbi_00000224",
                    "types": [
                        "Entity",
                        "Class"
                    ],
                    "short_form": "FBbi_00000224",
                    "label": "computer graphic"
                }
            }
        }
    ],
    "pub_syn": [],
    "def_pubs": [
        {
            "core": {
                "symbol": "",
                "iri": "http://flybase.org/reports/Unattributed",
                "types": [
                    "Entity",
                    "Individual",
                    "pub"
                ],
                "short_form": "Unattributed",
                "label": ""
            },
            "FlyBase": "",
            "PubMed": "",
            "DOI": ""
        }
    ]
}