Discovery
VFB integrates images and connectomics profiles of neurons from many sources. It classifies and records their properties using a standard, queryable classification. This standardises the names of neuron types across sources, so you don’t need to worry about differences in nomenclature uses and supports queries for neurons by their classification.
Required packages: vfb-connect and python-catmaid (pymaid & navis)
!pip install vfb-connect --upgrade
!pip install python-catmaid --upgrade
A note on using these notebooks
This is designed as an interactive tutorial. Feel free to add code cells below each example to try out variations of your own.
How to find neurons across datasets
VirtualFlyBrain integrates images and connectomics profiles of neurons from many sources. It classifies and records their properties using a standard, queryable classification (The Drosophila Anatomy Ontology). This standardises the names of neuron types across sources, so you don’t need to worry about differences in nomenclature uses and supports queries for neurons by their classification.
# Import libs and initialise API objects
from vfb_connect.cross_server_tools import VfbConnect
import pandas as pd
vc = VfbConnect()
import pymaid
import navis
navis.set_pbars(jupyter=False)
pymaid.set_pbars(jupyter=False)
# Connect to the VFB CATMAID server hosting the FAFB data
rm = pymaid.connect_catmaid(server="https://fafb.catmaid.virtualflybrain.org/", api_token=None, max_threads=10)
# Test call to see if connection works
print(f'Server is running CATMAID version {rm.catmaid_version}')
WARNING: Could not load OpenGL library.
INFO : Global CATMAID instance set. Caching is ON. (pymaid)
Server is running CATMAID version 2020.02.15-905-g93a969b37
Finds neurons by type (classification) across datasets
We can use the vc.get_instances method in combination with the name of a neuron type on VFB to find individual neurons from multiple sources.
Use the search tool on VFB to find neuron types by name or synonym:
Use either the full name or the Symbol to query for neurons:
DA3adPN = vc.get_instances("adult Drosulfakinin neuron", summary=True)
pd.DataFrame.from_records(DA3adPN)
| label | symbol | id | tags | parents_label | parents_id | data_source | accession | templates | dataset | license | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | DSKMP3_R - 327937328 | VFB_jrchjti6 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 327937328 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 1 | DSKMP1A(PVM02)_L - 1260833150 | VFB_jrchjti3 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 1260833150 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 2 | DSKMP3_R - 328559607 | VFB_jrchjti7 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 328559607 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 3 | DSKMP1B_R - 1352077058 | VFB_jrchjti4 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 1352077058 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 4 | DSKMP1B(PVM02)_L - 1011184205 | VFB_jrchjti5 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 1011184205 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 5 | DSKMP1A_R - 1135837629 | VFB_jrchjti2 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult Drosulfakinin neuron | FBbt_00048999 | neuprint_JRC_Hemibrain_1point1 | 1135837629 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... |
Find neurons by location
We can use the same method to search for neurons by location, using simple queries.
# Find neurons by location. The following query works across multiple data sources and both sides of the brain.
# Results may be incomplete & may include minor overlap inferred from low synapse counts
neurons_in_DA3 = vc.get_instances("'neuron' that 'overlaps' some 'antennal lobe glomerulus DA3'", summary=True)
neurons_in_DA3_tab = pd.DataFrame.from_records(neurons_in_DA3)
neurons_in_DA3_tab[0:5]
Running query: FBbt:00005106 that RO:0002131 some FBbt:00003934
Query URL: http://owl.virtualflybrain.org/kbs/vfb/instances?object=FBbt%3A00005106+that+RO%3A0002131+some+FBbt%3A00003934&prefixes=%7B%22FBbt%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FFBbt_%22%2C+%22RO%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_%22%2C+%22BFO%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FBFO_%22%7D&direct=False
Query results: 158
| label | symbol | id | tags | parents_label | parents_id | data_source | accession | templates | dataset | license | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | lLN2T_a(Tortuous)_R - 5813056598 | VFB_jrchk8bi | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813056598 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 1 | ORN_DL3_R - 1671625186 | VFB_jrchk1hj | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult olfactory receptor neuron Or65 | FBbt_00067011 | neuprint_JRC_Hemibrain_1point1 | 1671625186 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 2 | DA4m_adPN_R - 574037266 | VFB_jrchjtdq | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe projection neuron DA4m adPN | FBbt_00047714 | neuprint_JRC_Hemibrain_1point1 | 574037266 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 3 | Uniglomerular mALT DA3 adPN#L1 (FAFB:2449792) | VFB_0010123h | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe projection neuron DA3 adPN | FBbt_00100384 | catmaid_fafb | 2449792 | JRC2018Unisex | BatesSchlegel2020 | https://creativecommons.org/licenses/by-sa/4.0... | |
| 4 | lLN2T_e(Tortuous)_R - 1699974843 | VFB_jrchk8br | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1699974843 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... |
# Find local interneurons (intrinsic neurons) of the AL, overlapping DA3:
local_in_DA3 = vc.get_instances("'local interneuron of adult antennal lobe' that 'overlaps' some 'antennal lobe glomerulus DA3'",
summary=True)
local_in_DA3_tab = pd.DataFrame.from_records(local_in_DA3)
local_in_DA3_tab
Running query: FBbt:00007390 that RO:0002131 some FBbt:00003934
Query URL: http://owl.virtualflybrain.org/kbs/vfb/instances?object=FBbt%3A00007390+that+RO%3A0002131+some+FBbt%3A00003934&prefixes=%7B%22FBbt%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FFBbt_%22%2C+%22RO%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_%22%2C+%22BFO%22%3A+%22http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FBFO_%22%7D&direct=False
Query results: 53
| label | symbol | id | tags | parents_label | parents_id | data_source | accession | templates | dataset | license | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | lLN16b_R - 1887168462 | VFB_jrchk89w | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1887168462 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 1 | lLN1_c_R - 5813047691 | VFB_jrchk8ae | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813047691 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 2 | lLN2S(Star)_R - 1670627928 | VFB_jrchk8bb | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 1670627928 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 3 | lLN2F_b(Full)_R - 5813024698 | VFB_jrchk8an | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2F | FBbt_00049812 | neuprint_JRC_Hemibrain_1point1 | 5813024698 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 4 | lLN2T_c(Tortuous)_R - 1671292719 | VFB_jrchk8bo | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1671292719 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 5 | lLN1_c_R - 5813062199 | VFB_jrchk8af | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813062199 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 6 | lLN1_a_R - 5813130064 | VFB_jrchk8a4 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813130064 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 7 | lLN1_c_R - 1702651358 | VFB_jrchk8aj | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1702651358 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 8 | lLN2T_e(Tortuous)_R - 1640922516 | VFB_jrchk8bs | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1640922516 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 9 | lLN11_R - 1670278227 | VFB_jrchk89e | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1670278227 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 10 | lLN2P_c(Patchy)_R - 2105086391 | VFB_jrchk8b0 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2P | FBbt_00049813 | neuprint_JRC_Hemibrain_1point1 | 2105086391 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 11 | lLN2T_b(Tortuous)_R - 1640572741 | VFB_jrchk8bl | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1640572741 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 12 | lLN1_c_R - 1578826464 | VFB_jrchk8ah | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1578826464 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 13 | lLN2P_a(Patchy)_R - 2041621893 | VFB_jrchk8ao | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2P | FBbt_00049813 | neuprint_JRC_Hemibrain_1point1 | 2041621893 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 14 | lLN2S(Star)_R - 1762359683 | VFB_jrchk8bc | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 1762359683 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 15 | lLN1_b_R - 5813054622 | VFB_jrchk8a8 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813054622 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 16 | lLN2F_a(Full)_R - 1670287030 | VFB_jrchk8al | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2F | FBbt_00049812 | neuprint_JRC_Hemibrain_1point1 | 1670287030 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 17 | lLN12a_R - 1826445251 | VFB_jrchk89g | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1826445251 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 18 | lLN11_R - 2040301572 | VFB_jrchk89d | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 2040301572 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 19 | il3LN6_R - 5813018460 | VFB_jrchk88v | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 5813018460 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 20 | lLN2R_b(Regional)_R - 5813076969 | VFB_jrchk8b6 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2R | FBbt_00049814 | neuprint_JRC_Hemibrain_1point1 | 5813076969 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 21 | lLN16a_R - 1702318692 | VFB_jrchk89t | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1702318692 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 22 | lLN2T_d(Tortuous)_R - 1667251683 | VFB_jrchk8bp | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1667251683 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 23 | lLN2R_b(Regional)_R - 1702305987 | VFB_jrchk8b5 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2R | FBbt_00049814 | neuprint_JRC_Hemibrain_1point1 | 1702305987 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 24 | v2LN35_R - 1733056086 | VFB_jrchk8ew | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 1733056086 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 25 | lLN1_b_R - 1610530558 | VFB_jrchk8ac | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1610530558 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 26 | lLN2S(Star)_R - 1640922754 | VFB_jrchk8b8 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 1640922754 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 27 | lLN1_c_R - 1824101645 | VFB_jrchk8ag | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1824101645 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 28 | lLN1_c_R - 1547454812 | VFB_jrchk8ai | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1547454812 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 29 | lLN1_b_R - 5813069055 | VFB_jrchk8aa | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813069055 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 30 | lLN1_b_R - 1642623277 | VFB_jrchk8ad | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1642623277 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 31 | lLN2T_a(Tortuous)_R - 5813054726 | VFB_jrchk8bh | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813054726 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 32 | lLN2F_b(Full)_R - 1640909284 | VFB_jrchk8am | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2F | FBbt_00049812 | neuprint_JRC_Hemibrain_1point1 | 1640909284 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 33 | lLN2F_a(Full)_R - 5901218894 | VFB_jrchk8ak | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2F | FBbt_00049812 | neuprint_JRC_Hemibrain_1point1 | 5901218894 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 34 | lLN2T_e(Tortuous)_R - 1699974843 | VFB_jrchk8br | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1699974843 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 35 | lLN10_R - 1825789179 | VFB_jrchk89b | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1825789179 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 36 | lLN2S(Star)_R - 1702306037 | VFB_jrchk8b7 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 1702306037 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 37 | lLN2S(Star)_R - 1732995501 | VFB_jrchk8ba | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 1732995501 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 38 | lLN2S(Star)_R - 5813069085 | VFB_jrchk8b9 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2S | FBbt_00049815 | neuprint_JRC_Hemibrain_1point1 | 5813069085 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 39 | v2LN3b_R - 1888199872 | VFB_jrchk8fg | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 1888199872 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 40 | lLN1_b_R - 1640887603 | VFB_jrchk8a6 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 1640887603 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 41 | lLN1_b_R - 5813078440 | VFB_jrchk8a7 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813078440 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 42 | lLN2T_b(Tortuous)_R - 5813034493 | VFB_jrchk8bm | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813034493 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 43 | lLN1_b_R - 5813054777 | VFB_jrchk8a9 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813054777 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 44 | v2LN30_R - 1671620613 | VFB_jrchk8e8 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 1671620613 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 45 | v2LN3b_R - 5813034455 | VFB_jrchk8ff | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 5813034455 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 46 | lLN2T_a(Tortuous)_R - 5813032595 | VFB_jrchk8bd | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813032595 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 47 | lLN2T_a(Tortuous)_R - 5813056598 | VFB_jrchk8bi | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813056598 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 48 | lLN1_b_R - 5813054725 | VFB_jrchk8ab | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult local interneuron of the lateral ALl1 ne... | FBbt_00007394 | neuprint_JRC_Hemibrain_1point1 | 5813054725 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 49 | lLN2P_b(Patchy)_R - 1946178096 | VFB_jrchk8au | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2P | FBbt_00049813 | neuprint_JRC_Hemibrain_1point1 | 1946178096 | JRC2018Unisex|JRC_FlyEM_Hemibrain | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 50 | lLN2T_a(Tortuous)_R - 5813055277 | VFB_jrchk8bf | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 5813055277 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 51 | l2LN18_R - 5813054773 | VFB_jrchk891 | Entity|has_image|Adult|Anatomy|has_neuron_conn... | local interneuron of adult antennal lobe | FBbt_00007390 | neuprint_JRC_Hemibrain_1point1 | 5813054773 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... | |
| 52 | lLN2T_a(Tortuous)_R - 1762354941 | VFB_jrchk8bg | Entity|has_image|Adult|Anatomy|has_neuron_conn... | adult antennal lobe lateral local neuron 2T | FBbt_00049816 | neuprint_JRC_Hemibrain_1point1 | 1762354941 | JRC_FlyEM_Hemibrain|JRC2018Unisex | Xu2020NeuronsV1point1 | https://creativecommons.org/licenses/by/4.0/le... |
# Find neurons by dataset/paper - on CATMAID
bates = pymaid.find_neurons(annotations='Paper: Bates and Schlegel et al 2020')
bates
INFO : Found 583 neurons matching the search parameters (pymaid)
| type | name | skeleton_id | n_nodes | n_connectors | n_branches | n_leafs | cable_length | soma | units | |
|---|---|---|---|---|---|---|---|---|---|---|
| 0 | CatmaidNeuron | Uniglomerular mALT DA1 lPN 57316 2863105 ML | 2863104 | NA | NA | NA | NA | NA | NA | 1 nanometer |
| 1 | CatmaidNeuron | Uniglomerular mALT DA3 adPN 57350 HG | 57349 | NA | NA | NA | NA | NA | NA | 1 nanometer |
| ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... |
| 581 | CatmaidNeuron | Multiglomerular mlALT vPN VM7d+VM5d+DC4+6 LTS ... | 4624378 | NA | NA | NA | NA | NA | NA | 1 nanometer |
| 582 | CatmaidNeuron | Uniglomerular mALT DL2d adPN 57342 ML | 57341 | NA | NA | NA | NA | NA | NA | 1 nanometer |
# Inspect what datasets are available on VFB
ds = vc.neo_query_wrapper.get_datasets(summary=True)
ds_tab = pd.DataFrame.from_records(ds)
ds_tab.sort_values(by=['id'])
| label | symbol | id | tags | description | miniref | FlyBase | PMID | DOI | |
|---|---|---|---|---|---|---|---|---|---|
| 81 | EM L1 Andrade et al. 2019 | Andrade2019 | Entity|Individual|DataSet | [L1 EM reconstructed neurons from Andrade et a... | Andrade et al., 2019, Curr. Biol. 29(3): 412--... | FBrf0241389 | 30661802 | 10.1016/j.cub.2018.12.012 | |
| 16 | MBONs and split-GAL4 lines that target them (A... | Aso2014 | Entity|Individual|DataSet | [] | Aso et al., 2014, eLife 3: e04577 | FBrf0227179 | 25535793 | 10.7554/eLife.04577 | |
| 19 | split-GAL4 lines for dopaminergic neurons (Aso... | AsoRubin2016 | Entity|Individual|DataSet | [For comparison of the properties of memories ... | Aso and Rubin, 2016, eLife 5: e16135 | FBrf0233230 | 27441388 | 10.7554/eLife.16135 | |
| 52 | EM FAFB Bates and Schlegel et al 2020 | BatesSchlegel2020 | Entity|Individual|DataSet | [FAFB EM reconstructed neurons from Bates and ... | Bates and Schlegel et al., 2020 | 10.1016/j.cub.2020.06.042 | |||
| 0 | Larval olfactory system neurons - EM (Berk2016) | Berck2016 | Entity|Individual|DataSet | [Berck, Khandelwal et al. 2016] | Berck et al., 2016, eLife 5: e14859 | FBrf0232785 | 27177418 | 10.7554/eLife.14859 | |
| ... | ... | ... | ... | ... | ... | ... | ... | ... | ... |
| 30 | Lee lab adult brain lineage clone image set | Yu2013 | Entity|Individual|DataSet | [An exhaustive set of lineage clones covering ... | Yu et al., 2013, Curr. Biol. 23(8): 633--643 | FBrf0221412 | 23541733 | 10.1016/j.cub.2013.02.057 | |
| 15 | EM L1 Zarin, Mark et al. 2019 | Zarin2019 | Entity|Individual|DataSet | [L1 EM reconstructed neurons from Zarin, Mark ... | Zarin, Mark et al., 2019 | 10.1101/617977 | |||
| 48 | EM FAFB Zheng et al 2018 | Zheng2018 | Entity|Individual|DataSet | [FAFB EM reconstructed neurons from Zheng et a... | Zheng et al., 2018, Cell 174(3): 730--743.e22 | FBrf0239557 | 30033368 | 10.1016/j.cell.2018.06.019 | |
| 34 | EM FAFB Zheng et al 2020 | Zheng2020 | Entity|Individual|DataSet | [FAFB EM reconstructed neurons from Zheng et a... | Zheng et al. 2020 | 10.1101/2020.04.17.047167 | |||
| 28 | Larval motor circuit neurons (Zwart2016) | Zwart2016 | Entity|Individual|DataSet | [Zwart et al. 2016] | Zwart et al., 2016, Neuron 91(3): 615--628 | FBrf0233076 | 27427461 | 10.1016/j.neuron.2016.06.031 |
83 rows × 9 columns
sayin_tab = pd.DataFrame.from_records(vc.get_instances_by_dataset('Sayin2019', summary=True))
sayin_tab
| label | symbol | id | tags | parents_label | parents_id | data_source | accession | templates | dataset | license | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | OA-VPM3 (FAFB:1329078) | VFB_001001dr | Entity|Octopaminergic|Adult|Anatomy|has_image|... | octopaminergic VPM3 neuron | FBbt_00110151 | catmaid_fafb | 1329078 | JRC2018Unisex | Sayin2019 | https://creativecommons.org/licenses/by-sa/4.0... | |
| 1 | OA-VPM4 (FAFB:1191261) | VFB_001001dq | Entity|Octopaminergic|Adult|Anatomy|has_image|... | octopaminergic VPM4 neuron | FBbt_00110152 | catmaid_fafb | 1191261 | JRC2018Unisex | Sayin2019 | https://creativecommons.org/licenses/by-sa/4.0... |
vc.get_connected_neurons_by_type(upstream_type='LNd', downstream_type='adult descending neuron', weight=20)
| upstream_neuron_id | upstream_neuron_name | weight | downstream_neuron_id | downstream_neuron_name | upstream_class | downstream_class | up_data_source | up_accession | down_source | down_accession | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | VFB_jrchjzxx | LNd_R - 5813021192 | 25 | VFB_jrchjthm | DNp27_R - 1072063538 | LNd neuron | descending neuron of the posterior brain DNp27 | neuprint_JRC_Hemibrain_1point1 | 5813021192 | neuprint_JRC_Hemibrain_1point1 | 1072063538 |
# Intra pacemaker neuron neuron connections
vc.get_connected_neurons_by_type(upstream_type='pacemaker neuron', downstream_type='pacemaker neuron', weight=20)
| upstream_neuron_id | upstream_neuron_name | weight | downstream_neuron_id | downstream_neuron_name | upstream_class | downstream_class | up_data_source | up_accession | down_source | down_accession | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | VFB_jrchjzxy | LNd_R - 5813069648 | 37 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | LNd neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 5813069648 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 1 | VFB_jrchk089 | LPN_R - 480029788 | 43 | VFB_jrchk08a | LPN_R - 450034902 | LP neuron | LP neuron | neuprint_JRC_Hemibrain_1point1 | 480029788 | neuprint_JRC_Hemibrain_1point1 | 450034902 |
| 2 | VFB_jrchjtf0 | DN1pA_R - 324846570 | 25 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1p neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 324846570 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 3 | VFB_jrchjtf0 | DN1pA_R - 324846570 | 37 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1p neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 324846570 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 4 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | 40 | VFB_jrchjzxy | LNd_R - 5813069648 | s-LNv neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 511051477 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 5 | VFB_jrchjtf3 | DN1pA_R - 387166379 | 25 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1p neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 387166379 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 6 | VFB_jrchjtf1 | DN1pA_R - 325529237 | 30 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1p neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 325529237 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 7 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | 25 | VFB_jrchjzxx | LNd_R - 5813021192 | s-LNv neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 511051477 | neuprint_JRC_Hemibrain_1point1 | 5813021192 |
| 8 | VFB_jrchjtez | DN1pA_R - 5813010153 | 25 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1p neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 5813010153 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 9 | VFB_jrchjzxy | LNd_R - 5813069648 | 29 | VFB_jrchjzxw | LNd_R - 5813056917 | LNd neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 5813069648 | neuprint_JRC_Hemibrain_1point1 | 5813056917 |
| 10 | VFB_jrchjtf2 | DN1pA_R - 387944118 | 22 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1p neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 387944118 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 11 | VFB_jrchjtf2 | DN1pA_R - 387944118 | 34 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1p neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 387944118 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 12 | VFB_jrchjtf1 | DN1pA_R - 325529237 | 33 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1p neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 325529237 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 13 | VFB_jrchk08a | LPN_R - 450034902 | 30 | VFB_jrchk089 | LPN_R - 480029788 | LP neuron | LP neuron | neuprint_JRC_Hemibrain_1point1 | 450034902 | neuprint_JRC_Hemibrain_1point1 | 480029788 |
| 14 | VFB_jrchjtey | DN1a_R - 5813022274 | 63 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1a neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 5813022274 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 15 | VFB_jrchjtex | DN1a_R - 264083994 | 55 | VFB_jrchk8e0 | 5th s-LNv - 511051477 | DN1a neuron | s-LNv neuron | neuprint_JRC_Hemibrain_1point1 | 264083994 | neuprint_JRC_Hemibrain_1point1 | 511051477 |
| 16 | VFB_jrchjtey | DN1a_R - 5813022274 | 75 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1a neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 5813022274 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 17 | VFB_jrchjtex | DN1a_R - 264083994 | 79 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1a neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 264083994 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 18 | VFB_jrchjtf3 | DN1pA_R - 387166379 | 30 | VFB_jrchjzxy | LNd_R - 5813069648 | DN1p neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 387166379 | neuprint_JRC_Hemibrain_1point1 | 5813069648 |
| 19 | VFB_jrchjzxy | LNd_R - 5813069648 | 21 | VFB_jrchjzxx | LNd_R - 5813021192 | LNd neuron | LNd neuron | neuprint_JRC_Hemibrain_1point1 | 5813069648 | neuprint_JRC_Hemibrain_1point1 | 5813021192 |
vc.get_connected_neurons_by_type(upstream_type='adult neuron', downstream_type='adult Drosulfakinin neuron', weight=20)
| upstream_neuron_id | upstream_neuron_name | weight | downstream_neuron_id | downstream_neuron_name | upstream_class | downstream_class | up_data_source | up_accession | down_source | down_accession | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | VFB_jrchjsj3 | AstA1_L - 362473525 | 28 | VFB_jrchjti4 | DSKMP1B_R - 1352077058 | adult neuron | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 362473525 | neuprint_JRC_Hemibrain_1point1 | 1352077058 |
| 1 | VFB_jrchk5zh | SLP384_R - 482702027 | 20 | VFB_jrchjti6 | DSKMP3_R - 327937328 | adult superior lateral protocerebrum neuron 384 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 482702027 | neuprint_JRC_Hemibrain_1point1 | 327937328 |
| 2 | VFB_jrchjrjn | AVLP001_R - 1321564092 | 26 | VFB_jrchjti2 | DSKMP1A_R - 1135837629 | adult anterior ventrolateral protocerebrum neu... | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 1321564092 | neuprint_JRC_Hemibrain_1point1 | 1135837629 |
| 3 | VFB_jrchk5eo | SLP066_R - 327843160 | 42 | VFB_jrchjti4 | DSKMP1B_R - 1352077058 | adult superior lateral protocerebrum neuron 066 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 327843160 | neuprint_JRC_Hemibrain_1point1 | 1352077058 |
| 4 | VFB_jrchk5qf | SLP244_R - 298214577 | 27 | VFB_jrchjti6 | DSKMP3_R - 327937328 | adult superior lateral protocerebrum neuron 244 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 298214577 | neuprint_JRC_Hemibrain_1point1 | 327937328 |
| ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... | ... |
| 56 | VFB_jrchk6zu | SMP449_R - 5813026592 | 25 | VFB_jrchjti4 | DSKMP1B_R - 1352077058 | adult superior medial protocerebrum neuron 449 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 5813026592 | neuprint_JRC_Hemibrain_1point1 | 1352077058 |
| 57 | VFB_jrchk5jv | SLP152_R - 487812620 | 28 | VFB_jrchjti4 | DSKMP1B_R - 1352077058 | adult superior lateral protocerebrum neuron 152 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 487812620 | neuprint_JRC_Hemibrain_1point1 | 1352077058 |
| 58 | VFB_jrchjrxe | AVLP223_R - 1356743512 | 27 | VFB_jrchjti2 | DSKMP1A_R - 1135837629 | adult anterior ventrolateral protocerebrum neu... | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 1356743512 | neuprint_JRC_Hemibrain_1point1 | 1135837629 |
| 59 | VFB_jrchk5qg | SLP244_R - 297533212 | 33 | VFB_jrchjti6 | DSKMP3_R - 327937328 | adult superior lateral protocerebrum neuron 244 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 297533212 | neuprint_JRC_Hemibrain_1point1 | 327937328 |
| 60 | VFB_jrchk6g5 | SMP157_R - 421041565 | 32 | VFB_jrchjti4 | DSKMP1B_R - 1352077058 | adult superior medial protocerebrum neuron 157 | adult Drosulfakinin neuron | neuprint_JRC_Hemibrain_1point1 | 421041565 | neuprint_JRC_Hemibrain_1point1 | 1352077058 |
61 rows × 11 columns
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Last modified January 27, 2022: reverting to list (dd75b36)