VFB Content Report

An auto generated report detailing the current types and quantity of images and annotations currently publicly available on VFB. This will update after a new data release.
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VFB Content Report 2025-02-21

Report of content found at http://pdb.virtualflybrain.org on Fri, 21 Feb 2025 00:54:56

Ontology Content

Anatomy Classes Publications
All Terms 28261 2305
All Nervous System Parts 21614 1803
All Neurons 17943 1513
Characterised Neurons 6619 1511
Provisional Neurons 11324 20
All Nervous System Regions 1433 250
Synaptic Neuropils 625 141
Neuron Projection Bundles 598 123
Cell Body Rinds 132 8
Sense Organs 861 166

158298 formal assertions, of which 69074 are SubClassOf assertions and 89224 are other relationship types

144287 formal assertions on nervous system components, of which 60989 are SubClassOf assertions and 83298 are other relationship types

Image Content
(excludes hemibrain v1.0.1)

359098 total images from 112 datasets
277415 single neuron images of 14010 cell types
44067 images of expression patterns of 17066 drivers
3117 images of expression patterns of 769 split combinations
61163 images of expression pattern fragments of 5105 drivers

Annotations

93504 annotations recording 3252 types of anatomical structure that 12812 specific driver lines are expressed in.
85504 annotations recording 2416 parts of the nervous system that 11601 specific driver lines are expressed in.
10386 annotations recording 1581 types of neuron that 2899 specific driver lines are expressed in.
4633 annotations recording 608 types of neuron that 1167 specific split combinations are expressed in.

Connectivity

Neuron Number of Neurons Input/Output Entity Number of Entities Connections
Any neuron (individuals) 244974 Any neuron (individuals) 244974 18158951
Any neuron (individuals) 22585 Region (individuals) 218 299683
Any neuron (classes) 1661 Muscle (classes) 233 2144
Any neuron (classes) 773 Sense organ (classes) 433 534

Content by Template
(excludes hemibrain v1.0.1)

Template Name Datasets Images Single Neurons EM Neurons Full Expression Patterns Split Expression Patterns Partial Expression Patterns Painted domains
Adult Head (McKellar2020) 1 18 0 0 0 0 0 0
L1 larval CNS ssTEM - Cardona/Janelia 24 5019 5019 5019 0 0 0 0
JRC2018UnisexVNC 22 44363 25789 25788 8314 625 10240 21
adult brain template Ito2014 1 75 1 0 0 0 0 75
Adult T1 Leg (Kuan2020) 2 678 464 0 0 0 0 4
adult brain template JFRC2 21 41940 16318 0 25272 600 16127 58
adult VNS template - Court2018 9 3194 1 0 3171 480 0 21
JRC_FlyEM_Hemibrain 2 22701 22588 22587 0 0 0 114
JRC2018Unisex 69 291993 237349 220551 31655 1632 38796 46
L3 CNS template - Wood2018 4 12877 8639 0 381 381 12178 255